In short, you do not need many dependencies. Basic usage only
requires a running system, and to install the iFit package.
Further add-ons can be installed later.
When installing a 'stand-alone' release of iFit, you only
need to install the Matlab Compiler Runtime (free), available
below. There is NO other dependency. The package contains
everything required. The stand-alone package is distributed for Linux, Windows and Mac OSX systems. See below to
download the required stand-alone
package.
The stand-alone version provides full
iFit functionality at no cost. You can execute any
script (list of commands) using iFit and Matlab functions.
However, you can not define new functions.
Refer to the
'stand-alone'
release of iFit page for more
information on the features and limitations.
iFit can be transparently used from Python/NumPy. In principle, this is better suited for users not wanting to use Matlab, preferring the Python language. You will need to install Python and NumPy. We recommend the Python(x,y) for Windows, Anaconda, or Enthought Canopy for all systems. Refer to our PyFit help page.
In case you wish to use iFit in order to perform iterative/optimised McStas/McXtrace neutron Monte-Carlo ray-tracing simulations, you obviously need to install these packages. Refer to our McStas help page.
In case you wish to perform lattice dynamics computations to estimate the phonon dispersion relations in solid state materials, you will need to install at least the ASE. Please read the Phonons documentation. Warning: Most of the DFT codes are designed to run on Linux systems. We thus recommend you start from a Debian-class system, or use a Virtual machine.
To facilitate the handling of e.g. ENDF and ACE files, the PyNE environment may be installed.
We prefer
Linux systems, such as Ubuntu, when
handling large data sets, and performing McStas optimizations, so that we
fully use multi-core systems (e.g. through threads and MPI). You may
use our ILL/CS Live
Ubuntu-iFit ready-to-run systems with Phonons, McStas and iFit
(standalone) all pre-installed, to try-out. Source code |
Requires a Matlab license to run [ Download zip, 50 Mb, Changes ] |
 Linux |
64
bits: Debian: see below. Other: Use the MCR bin installer and zip archives. |
 Windows |
64 bits: Use the MCR installer then the iFit installer. |
 Mac OSX
|
64
bits: Use the iFit.app, which includes
the MCR (no need to install it separately). Use
Ctrl-click/Open to allow the application the first time. |
 VirtualBox appliance (OVA) |
For all computers using VirtualBox. Get it
HERE.
Assign 4 Gb mem, all your CPU cores. Login 'lambda'
with 'illill'. |
Debian-class systems (e.g. Ubuntu, Mint, Debian, etc...) are our best choice. To get a complete new system, first install e.g. Ubuntu (see here), then apply the following procedure to add iFit.
An easy way to install packages on an already installed Debian-class system is to make use of the mccode.org repository. Use e.g. for Ubuntu 16.04 Xenial:
% cd /etc/apt/sources.list.dor for Ubuntu 14.04 Trusty/Debian 8 Jessie
% sudo wget http://packages.mccode.org/debian/mccode-xenial.list
% sudo wget http://packages.mccode.org/debian/mccode.listthen:
% sudo apt-get updateand for Phonons, McStas and nuclear engineering stuff
% sudo apt-get install ifit mcrinstaller libxmu6 libxt6 libxp6 libxpm4 libxc1
% sudo apt-get install ifit-phonons pyne mcstas-suiteThis can also be done from e.g. Synaptic (menu Settings/repositories) and Ubuntu Software Center (menu Edit/Software Sources) ; tab Other Software/Add... Then select packages ifit and mcrinstaller and install them.
If you use the Debian package installers (.deb), nothing else is required. Double click the deb packages (MCR, then iFit) and wait. Then you can start iFit from the Dash or from menu Applications/Education/iFit. Drag-n-drop of data files is possible on the iFit launcher, as well as on operator icons from /usr/local/ifit/.
You can also install the packages manually by directly accessing our Deb repository, get the Debian packages, e.g. ifit-x.y and mcrinstaller, then (fix the file names):
% sudo dpkg -i ifit-x.y-amd64.deb mcrinstaller-7.13-amd64.debIf you do not have Matlab, the installer will ask you if you wish to use iFit as a replacement, then will automatically create a link:
% sudo ln -s /usr/local/ifit/ifit /usr/local/bin/matlab
We recommend to install the MCR in /opt/MATLAB (requires administrative privileges).
chmod u+x MCRINstaller.bin
sudo ./MCRInstaller.binPrefer the /opt/MATLAB location.
Then install the iFit stand-alone package where-ever you wish (/usr/local/ifit is recommended). Launch ifit from there.
If you have not installed the MCR in /opt/MATLAB, you need to define the MCRROOT environment variable to its location prior to starting iFit :
export MCRROOT=/opt/MATLAB/MATLAB_Compiler_Runtime/v713/
ifitIf you do not have Matlab and wish to use iFit as a replacement, create a link:
% sudo ln -s /usr/local/ifit/ifit /usr/local/bin/ifit
% sudo ln -s /usr/local/ifit/ifit /usr/local/bin/matlab
The prepared iFit App contains the Matlab Runtime which does not need to be installed separately.
To Open the iFit App the first time and pass the authentication step, press the left Ctrl key and click the iFit icon (after extraction from the ZIP). Then select the Open button.
You can also place the iFit directory in /Applications or /usr/local/ifit, and create links, especially if you do not have Matlab and wish to use iFit as a replacement:
% sudo ln -s /usr/local/ifit/ifit /usr/local/bin/ifitRecent MacOSX systems (El capitan, Sierra) provide a Java 7 or 8 version, whereas the standalone requires a Java 6. Install the Java 6 from here, then install iFit standalone.
% sudo ln -s /usr/local/ifit/ifit /usr/local/bin/matlab
Also, you may need to install an X server. Get it at https://www.xquartz.org/.
Warning: install all DFT codes for Phonons is not easy under Mac OSX. We then recommend you run a VirtualBox machine (see below). Refer to the dedicated phonon-oriented installation.
Install the MCR by double-clicking the corresponding MCRInstaller.exe. The install location defaults to C:\Program Files\MATLAB. Then use the iFit installer.
To launch iFit, click on the 'ifit' icon in the installation directory. You can also drag-n-drop files on the iFit icon to directly import data files and plot them (Linux and Windows systems). This also works when using the operators short cuts included in the iFit standalone directory (under Linux).
Warning: Phonons: installing all DFT codes for Phonons is not easy under Windows. We then recommend you run a VirtualBox machine (see below), or use the Windows Subsystem. Refer to the dedicated phonon-oriented installation.
It is possible to use a prepared distribution containing iFit, Phonons and McStas, all pre-installed. Get it HERE.
Install e.g. VirtualBox. Then import our VirtualBox Appliance (OVA). This is a pre-installed Virtual machine with iFit, Phonons, McStas and PyNE. Assign it e.g. 4 Gb memory, 30 Gb disk, and all your CPU cores. The user account is 'lambda' and its pass word is 'illill'.
You just need to copy the iFit directory somewhere, say in /path/to.
For our users who love challenges and command lines, this may be achieved e.g. with
- Extract first the iFit archive if needed.
- Just drag-drop the iFit directory in the target location that suits you.
% unzip iFit.zipStart Matlab by clicking on its icon or typing the matlab command in a terminal.
% cp -r iFit /path/to
% matlabIn order to use iFit, you need to import all its methods into Matlab each time you start it (this may be automated from the startup.m file).
>> addpath(genpath('/path/to/iFit'))This can also be done from the Matlab menu File/Set Path.../Add with subfolders... then enter the iFit location, and Save. That's all !
A list of fixed bugs and release history is recorded in the Changes page.
>> mex -setup % select compilerWhen mex is not configured, you may install any C compiler of: gcc, ifc, pgcc, clang/llvm, tcc.
[1] Microsoft Windows VS2008
>> addpath(genpath('/location/to/iFit')) % install iFit
>> iLoad compile % reload importer methods and recompile looktxt, cbf_uncompress and cif2hkl
>> iLoad compile
>> iLoad compilefrom the Matlab prompt. The C compiler to use may have to be specified with the command '>> mex -setup'. Send me the newly compiled looktxt MeX file in a tar.gz/zip archive, so that I update/add it to the distribution.
>> ifittest
which will test, in a few minutes, all the examples given in this
documentation and report failures. In principle all should go right.
Refer to the iFit Help in
case of trouble.